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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5778881_5780659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5778881 - 5780659

Intron Length:

1779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GGGGTCTCACGG

Flanking Amino Acid:

FGAGTTLTVLGQPKVSPTVH

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

81.6

0.71

0.7

75.8

26.2

Minor 5ss

34.1

-1.8

2.9

36.5

40.5

Minor BPS

36.2

-1.1

1.9

31.99

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039010

5778561 - 5788062

9502

ENSAPLT00000035196

5778561 - 5783754

5194