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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5783577_5788302_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5783577 - 5788302

Intron Length:

4726

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTA|GCAGGATTA

5'SS Class:

weak_major

3'SS Sequence:

TTCCCTGGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAG

U12 Branch Point Sequence:

TCCCTCTCCAGG

Flanking Amino Acid:

RPWSLLPLWLAALTQPASKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.3

55.8

41.1

Major BPS

46.3

-0.2

1.7

60.4

45.8

Major PPT

72.4

0.5

64.6

41.3

Minor 5ss

31.7

-2.1

4.3

47.8

43.5

Minor BPS

38.8

-1

2.1

39.73

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046655

5778561 - 5788353

9793

ENSAPLT00000030183

5778561 - 5788353

9793

ENSAPLT00000020090

5778384 - 5788353

9970