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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5799427_5800312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5799427 - 5800312

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCTCACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CTTTTCTGACCC

Flanking Amino Acid:

EIDAAFQDEFGFAYFLRGRD

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

74.9

0.56

0.8

66.4

34.3

Minor 5ss

29.5

-2.3

33.8

35.1

Minor BPS

57.6

0.22

1.8

70.43

41.2

Associated Gene:

Gene:

MMP11

Ensembl Gene ID:

ENSAPLG00000003064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003109

5790230 - 5800446

10217