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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5809321_5809896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5809321 - 5809896

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCAGC

5'SS Class:

major

3'SS Sequence:

TCTTCTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TGCAGGTTAACA

Flanking Amino Acid:

SISTEPPTYLREQKAKRNNQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

67.1

44.6

Major BPS

0.52

1.1

77.7

35.3

Major PPT

0.9

0.6

88.5

Minor 5ss

45.3

-0.5

2.7

61.2

43.3

Minor BPS

46.2

-0.2

2.4

60.49

45.3

Associated Gene:

Gene:

SMARCB1

Ensembl Gene ID:

ENSAPLG00000003296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044128

5806345 - 5816379

10035

ENSAPLT00000003385

5806345 - 5817197

10853