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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5810787_5811352_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5810787 - 5811352

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGG

5'SS Class:

major

3'SS Sequence:

TGTTCTGTATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTTAA

U12 Branch Point Sequence:

TGTTCTGTATCA

Flanking Amino Acid:

LRDAFTWNMNEKLMTPEMFS

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

67.1

43.8

Major BPS

55.5

0.14

1.1

47.4

37.5

Major PPT

75.2

0.57

74.2

40.2

Minor 5ss

41.4

-1

2.5

47.9

Minor BPS

0.06

2.2

71.66

40.8

Associated Gene:

Gene:

SMARCB1

Ensembl Gene ID:

ENSAPLG00000003296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003385

5806345 - 5817197

10853

ENSAPLT00000044128

5806345 - 5816379

10035