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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5811520_5811950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5811520 - 5811950

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACAG

5'SS Class:

major

3'SS Sequence:

CCCTTGTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

AAACAAATGACT

Flanking Amino Acid:

DQSDQRVIIKLNIHVGNISL

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

64.4

41.5

Major BPS

60.7

0.27

65.3

28.1

Major PPT

77.2

0.61

0.8

68.3

37.5

Minor 5ss

31.4

-2.1

38.9

46.2

Minor BPS

41.5

-0.5

1.9

56.65

38.3

Associated Gene:

Gene:

SMARCB1

Ensembl Gene ID:

ENSAPLG00000003296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044128

5806345 - 5816379

10035

ENSAPLT00000003385

5806345 - 5817197

10853