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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5812142_5816111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5812142 - 5816111

Intron Length:

3970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAAC

5'SS Class:

major

3'SS Sequence:

CCTGCCGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

GACCACTGACGG

Flanking Amino Acid:

LSWHQKTYAFSENPLPTVEI

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

66.5

Major BPS

61.3

0.28

52.7

34.2

Major PPT

69.1

0.43

0.9

61.3

Minor 5ss

30.8

-2.2

3.4

42.1

44.9

Minor BPS

35.9

-1.2

1.9

32.78

39.6

Associated Gene:

Gene:

SMARCB1

Ensembl Gene ID:

ENSAPLG00000003296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044128

5806345 - 5816379

10035

ENSAPLT00000003385

5806345 - 5817197

10853