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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5836508_5837099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5836508 - 5837099

Intron Length:

592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAA

U12 Branch Point Sequence:

TGTCTCCAAGCT

Flanking Amino Acid:

VSRFFTGVNAGVSMNIQPMY

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

67.5

39.2

Major BPS

55.5

0.14

1.3

66.7

39.7

Major PPT

65.3

0.35

57.1

38.6

Minor 5ss

36.2

-1.6

3.2

46.5

48.8

Minor BPS

44.1

-0.3

2.1

66.75

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037762

5831490 - 5842434

10945

ENSAPLT00000021990

5831490 - 5842319

10830

ENSAPLT00000004028

5831285 - 5842319

11035