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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5837554_5838337_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5837554 - 5838337

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGTTTCTG

5'SS Class:

weak_major

3'SS Sequence:

CAGGGGATGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

GCGATCTGAAGG

Flanking Amino Acid:

LLIDRGDRESCSLVLAALQK

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.1

47.6

42.2

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

40.2

-0.5

1.7

30.9

40.4

Minor 5ss

41.5

-0.9

59.3

45.1

Minor BPS

43.6

-0.6

1.8

40.98

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037762

5831490 - 5842434

10945

ENSAPLT00000021990

5831490 - 5842319

10830

ENSAPLT00000004028

5831285 - 5842319

11035