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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5839376_5840376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5839376 - 5840376

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGACTC

5'SS Class:

major

3'SS Sequence:

TTACGTTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTTATTTCACT

Flanking Amino Acid:

SCELIASVTCNMIIDYAGRR

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.1

58.9

40.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

74.1

0.54

41.6

Minor 5ss

33.1

-1.9

3.3

43.6

Minor BPS

66.1

0.59

1.9

88.66

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004028

5831285 - 5842319

11035

ENSAPLT00000021990

5831490 - 5842319

10830

ENSAPLT00000018621

5838520 - 5844726

6207