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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5840475_5840627_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5840475 - 5840627

Intron Length:

153

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCAGGTGAC

5'SS Class:

major

3'SS Sequence:

AGACTCGGATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGCAA

U12 Branch Point Sequence:

TTCCCTGCAACT

Flanking Amino Acid:

WAVVFMVALSHWMPYLSMAC

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.3

1.4

39.8

Major BPS

46.4

-0.2

1.4

54.9

40.8

Major PPT

0.02

1.1

44.1

Minor 5ss

23.5

-3.1

4.2

38.9

Minor BPS

48.7

-0

2.2

73.31

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021990

5831490 - 5842319

10830

ENSAPLT00000004028

5831285 - 5842319

11035