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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5841465_5842118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5841465 - 5842118

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TAACACTGAATT

Flanking Amino Acid:

LVGTAFPFIVKSLGHFCYVP

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.7

31.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

78.6

0.64

0.7

76.5

25.5

Minor 5ss

36.2

-1.6

2.8

41.9

38.9

Minor BPS

53.8

0.2

1.6

70.29

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021990

5831490 - 5842319

10830

ENSAPLT00000004028

5831285 - 5842319

11035