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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5849197_5850087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5849197 - 5850087

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAT

U12 Branch Point Sequence:

CTGACAGTCATT

Flanking Amino Acid:

IGRLLAGVCGGLGLNIHIMY

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

64.7

0.37

1.2

39.8

Major PPT

79.8

0.67

0.9

73.8

36.9

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

39.1

-0.7

2.4

57.08

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004784

5847316 - 5855184

7869