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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5859048_5859372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5859048 - 5859372

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTCTGTCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

GAATAAATACCT

Flanking Amino Acid:

QMSVINYTSPYIQKFINETW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

65.7

0.39

71.3

30.3

Major PPT

72.1

0.5

1.1

71.3

38.6

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

41.1

-0.6

2.1

58.8

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032014

5858973 - 5864869

5897