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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5859534_5860423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5859534 - 5860423

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

TGGATCATACCC

Flanking Amino Acid:

CSGYLTAKYGKKKCLLFNDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

86.6

0.82

0.8

81.1

30.9

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

45.9

-0.3

1.9

56.36

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032014

5858973 - 5864869

5897