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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5861138_5864790_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5861138 - 5864790

Intron Length:

3653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTCTGTTT

5'SS Class:

weak_major

3'SS Sequence:

GTGAGTATAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GTGAGTATAACA

Flanking Amino Acid:

LGLRYLCCSFCTDSKSKPWT

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.2

57.3

41.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

58.7

0.2

1.1

51.5

45.9

Minor 5ss

38.2

-1.3

3.5

53.6

45.4

Minor BPS

45.9

-0.3

57.61

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032014

5858973 - 5864869

5897