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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5874877_5878685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5874877 - 5878685

Intron Length:

3809

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCAGGTAGG

5'SS Class:

major

3'SS Sequence:

TGTTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTGTCTTACAGT

Flanking Amino Acid:

LIGRFLCGVSIYFYTFEVLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.4

61.2

43.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

0.74

0.8

77.1

37.1

Minor 5ss

25.4

-2.8

3.9

33.2

42.1

Minor BPS

46.7

-0.1

2.3

70.68

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021973

5874841 - 5881738

6898