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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5878791_5878872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5878791 - 5878872

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCTGTGTA

5'SS Class:

major

3'SS Sequence:

TTCTGTCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TTTTCTAGCACT

Flanking Amino Acid:

VGLSELLAAVSSIIERLGRK

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.3

66.8

38.7

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

79.4

0.66

0.8

77.2

31.6

Minor 5ss

37.9

-1.4

3.1

46.2

44.3

Minor BPS

50.7

0.1

2.2

81.75

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005377

5871584 - 5881738

10155