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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5889191_5890308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5889191 - 5890308

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

GTTTGTTTGTTT

Flanking Amino Acid:

CCGYLTTKYRKKKCQMFTNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

86.1

0.81

0.9

84.6

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

40.5

-0.6

3.6

70.84

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005406

5888134 - 5895085

6952