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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5890428_5890652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5890428 - 5890652

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACAGGTA

5'SS Class:

major

3'SS Sequence:

TTCCATCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGCATTTTAATA

Flanking Amino Acid:

ILAGRFLYGVGFSLNIHPQY

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.33

1.1

59.3

39.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.9

0.47

70.7

33.6

Minor 5ss

31.2

-2.1

3.9

46.5

Minor BPS

56.3

0.19

1.3

58.3

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005406

5888134 - 5895085

6952