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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5903486_5904196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5903486 - 5904196

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

ACTTACATAAAT

Flanking Amino Acid:

ISKHLHISADRVYINYFDMN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

78.5

0.64

0.8

72.5

32.3

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

53.2

0.18

1.9

74.1

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005665

5902597 - 5904450

1854