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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5907074_5907420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5907074 - 5907420

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

CTTTCAGGGACT

Flanking Amino Acid:

TLSFVIPIVQVLLDRVVCQV

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

78.8

0.65

76.3

37.7

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

46.1

-0.2

2.4

73.09

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005723

5904882 - 5915829

10948