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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5907785_5908354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5907785 - 5908354

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

CTTGTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TAGTGATGAGCT

Flanking Amino Acid:

AKEQEMLVQKKVTGYCSLAD

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

73.9

32.9

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

0.83

0.7

84.6

30.3

Minor 5ss

39.8

-1.1

3.1

48.3

42.4

Minor BPS

43.1

-0.4

2.2

63.56

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005723

5904882 - 5915829

10948