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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5913126_5915709_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5913126 - 5915709

Intron Length:

2584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

TGACGGGGCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TCATCCTGACGG

Flanking Amino Acid:

ALSKLEKTVKQRLAEAVKAG

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

41.7

-0.4

1.7

38.1

44.2

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

46.3

-0.4

2.1

52.76

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005723

5904882 - 5915829

10948