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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5918446_5919053_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5918446 - 5919053

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTCAACATT

5'SS Class:

weak_major

3'SS Sequence:

ACAAAATTTCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACAAAAT

U12 Branch Point Sequence:

GAGGCCTGGACA

Flanking Amino Acid:

RVDEYLSWQHKNMKKNNFFF

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.05

1.5

45.4

Major BPS

49.7

-0

1.1

55.6

Major PPT

46.5

-0.2

1.7

43.7

45.7

Minor 5ss

41.5

-0.9

3.1

57.3

40.6

Minor BPS

49.8

-0

1.6

56.77

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036268

5915398 - 5921224

5827