Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_5929901_5931466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5929901 - 5931466

Intron Length:

1566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

AATGTCTGAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTCTTGTTAATG

Flanking Amino Acid:

LKDGDFTLAECTAILLYLSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

84.4

0.85

34.5

Major PPT

0.25

1.1

55.9

43.7

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

50.2

-0.1

2.1

57.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005907

5925334 - 5935340

10007