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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5947447_5947618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5947447 - 5947618

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTACTGTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTTTACT

Flanking Amino Acid:

ELLEIRLLREAVLSGDEKEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

34.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

77.2

0.61

0.9

69.6

41.4

Minor 5ss

28.4

-2.5

34.8

41.6

Minor BPS

63.2

0.5

1.8

83.36

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643