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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5951897_5952926_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5951897 - 5952926

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

QNVLEPGATVGDISAGDKSK

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.76

0.8

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643