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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5953096_5953570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5953096 - 5953570

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTAC

5'SS Class:

strong_major

3'SS Sequence:

CGCTTTTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCTTTTATACAG

Flanking Amino Acid:

QELLVKFLPSRLRKLDPEEE

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

71.8

34.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

77.3

0.61

0.9

37.2

Minor 5ss

43.1

-0.8

3.1

57.8

47.2

Minor BPS

42.1

-0.7

1.9

45.29

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643