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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5953708_5954092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5953708 - 5954092

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

ATGTGCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGTGTTTATGT

Flanking Amino Acid:

SFDSTTFMESEKQDVHEFLL

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.3

33.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

71.8

0.49

0.9

62.8

43.6

Minor 5ss

38.3

-1.3

3.4

54.5

43.9

Minor BPS

47.7

-0.1

2.2

70.84

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643