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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5954311_5955494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5954311 - 5955494

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCAA

5'SS Class:

major

3'SS Sequence:

ACTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTTGTTTAATA

Flanking Amino Acid:

LRDSSNQHIKDMMLMSLSCM

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.81

0.7

80.6

30.6

Minor 5ss

30.1

-2.3

3.2

38.5

46.5

Minor BPS

67.7

0.55

1.7

77.18

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643