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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5956754_5957491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5956754 - 5957491

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTGATGTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

CTATCTGTGATG

Flanking Amino Acid:

HVDSVVSLEEIDKNLKSLER

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

72.5

0.51

64.6

45.7

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

47.3

-0.3

2.1

54.08

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643