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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5960162_5963868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5960162 - 5963868

Intron Length:

3707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTGGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

NSDGALLKFYVQVLEKELAA

Intron Amino Acid Position:

893

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

63.5

0.31

1.1

43.1

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643