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Intron Name: Anas_platyrhynchos_platyrhynchos_16_5964031_5965351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5964031 - 5965351

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TCCCCTTTCACC

Flanking Amino Acid:

RYLEEHSVQQVDLTWEDALF

Intron Amino Acid Position:

947

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

77.7

0.69

30.2

Major PPT

79.9

0.67

0.7

76.6

25.4

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

54.7

0.13

1.8

63.03

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006086

5946922 - 5965564

18643