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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6020368_6022377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6020368 - 6022377

Intron Length:

2010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGAGAT

5'SS Class:

major

3'SS Sequence:

TACTGTGGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TGTTCTTTTACT

Flanking Amino Acid:

SMLQRTPDQGKKYLRDADRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

70.5

33.3

Major BPS

76.3

0.65

67.3

39.3

Major PPT

62.6

0.28

1.1

56.3

43.2

Minor 5ss

39.9

-1.1

3.4

55.6

43.3

Minor BPS

74.5

0.85

1.5

88.94

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041971

6020261 - 6051371

31111