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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6050595_6051227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6050595 - 6051227

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGGATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TATTTAGCAATA

Flanking Amino Acid:

ISEETKQKLKSAILSAQSAA

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

62.6

0.31

59.1

37.6

Major PPT

70.5

0.46

1.1

70.3

44.5

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

44.2

-0.4

2.3

61.54

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041971

6020261 - 6051371

31111