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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6082105_6082428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6082105 - 6082428

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTTGC

5'SS Class:

major

3'SS Sequence:

GTTTCTGTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

TGCACATGGAAA

Flanking Amino Acid:

TNNTLDQHGHIILHSMHRYK

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.4

64.1

43.4

Major BPS

62.5

0.31

1.2

38.9

Major PPT

71.9

0.49

1.1

65.4

45.5

Minor 5ss

40.5

-1.1

3.1

50.8

39.7

Minor BPS

42.9

-0.5

1.8

51.42

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006655

6075813 - 6087326

11514