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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6083175_6084347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6083175 - 6084347

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TAACTGCAAACT

Flanking Amino Acid:

GFREHGKNTRREGRAKSQKP

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.1

43.1

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

84.1

0.77

0.8

76.7

37.4

Minor 5ss

46.1

-0.4

2.9

65.4

45.8

Minor BPS

39.9

-0.6

2.4

59.88

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006655

6075813 - 6087326

11514