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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6084440_6085734_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6084440 - 6085734

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATCTTG

5'SS Class:

major

3'SS Sequence:

CACTGTGAGTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCCCCACT

Flanking Amino Acid:

EEKESGAEERDFEKDENVDV

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

64.3

42.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

55.6

0.13

1.1

53.9

44.8

Minor 5ss

47.7

-0.2

2.8

61.5

44.4

Minor BPS

46.8

-0.1

2.2

72.26

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006655

6075813 - 6087326

11514