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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6085928_6086899_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6085928 - 6086899

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCGGGGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

GTAGGTTTGACT

Flanking Amino Acid:

QVPTPSYQTYRFHEAGDSQQ

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

70.1

40.6

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

56.7

0.15

1.1

52.4

41.6

Minor 5ss

-1.6

2.9

41.2

Minor BPS

49.6

0.05

1.9

68.05

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006655

6075813 - 6087326

11514