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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6126400_6127470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6126400 - 6127470

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCATGTCAC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

GYRRDVHQVRVACYRPSTDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.4

57.3

44.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

31.5

-2.1

3.9

40.1

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047800

6124553 - 6128516

3964