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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6126400_6127476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6126400 - 6127476

Intron Length:

1077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

DSGYRRDVHQVACYRPSTDQ

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006960

6126022 - 6133655

7634