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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6131161_6132364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6131161 - 6132364

Intron Length:

1204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

GGTGTCTAAAAT

Flanking Amino Acid:

ETLAAACQLQIPEVIKFCCD

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.2

30.5

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

31.6

-2.1

3.2

40.1

46.3

Minor BPS

48.8

-0

1.9

66.19

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006701

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020762

6126692 - 6133655

6964

ENSAPLT00000006960

6126022 - 6133655

7634