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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6178916_6179419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6178916 - 6179419

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTATGTATC

5'SS Class:

major

3'SS Sequence:

GATTTTTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TGTTCTATGATT

Flanking Amino Acid:

HWPLDASFRAVLEMWLSYLQ

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

37.8

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

70.4

0.46

69.7

41.2

Minor 5ss

48.6

-0.1

2.4

68.5

35.9

Minor BPS

62.8

0.48

1.6

80.61

35.1

Associated Gene:

Gene:

SMPD4

Ensembl Gene ID:

ENSAPLG00000007433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007790

6178342 - 6191496

13155