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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6182643_6186056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6182643 - 6186056

Intron Length:

3414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGCT

5'SS Class:

major

3'SS Sequence:

TCTGTTGTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTCCCTCCCC

Flanking Amino Acid:

YQKMQSPHVKLEVLHYRLSI

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

37.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

78.3

0.64

0.9

76.2

37.8

Minor 5ss

38.6

-1.3

3.4

57.4

46.8

Minor BPS

42.2

-0.6

3.8

75.12

41.7

Associated Gene:

Gene:

SMPD4

Ensembl Gene ID:

ENSAPLG00000007433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007790

6178342 - 6191496

13155