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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6191287_6191457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6191287 - 6191457

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTCGG

5'SS Class:

major

3'SS Sequence:

TGCTTTCCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

TGTGCCCTGATT

Flanking Amino Acid:

PHLQQPSFLLATLKADCVNK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

52.3

46.1

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

72.7

0.51

68.9

37.3

Minor 5ss

26.9

-2.6

28.6

38.4

Minor BPS

57.1

0.3

1.8

76.64

40.1

Associated Gene:

Gene:

SMPD4

Ensembl Gene ID:

ENSAPLG00000007433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007790

6178342 - 6191496

13155