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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6227425_6227976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6227425 - 6227976

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTTAC

U12 Branch Point Sequence:

AGTGACTTACTG

Flanking Amino Acid:

LFSGCSFPETGSQWIAVPGE

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

0.15

1.2

49.3

37.7

Major PPT

83.8

0.76

0.8

81.1

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

46.4

-0.4

1.9

51.25

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008329

6225505 - 6233789

8285