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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6229981_6231192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6229981 - 6231192

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTGCTGTGATT

Flanking Amino Acid:

MNDPAFSDAQVTAATLLSDE

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.1

0.45

43.2

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

48.3

-0

2.1

69.68

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008329

6225505 - 6233789

8285