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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6231396_6231813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6231396 - 6231813

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

GGTCACTGAAAG

Flanking Amino Acid:

AVSATSTINYPFGSFVYSNR

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

63.5

42.9

Major BPS

0.3

34.1

Major PPT

82.9

0.74

0.7

77.4

24.6

Minor 5ss

32.5

-2

2.7

41.4

38.2

Minor BPS

46.1

-0.4

1.8

50.71

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008329

6225505 - 6233789

8285