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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6231906_6232699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6231906 - 6232699

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAGAC

U12 Branch Point Sequence:

AAGAATAAGACT

Flanking Amino Acid:

FCIVNRSINPGERPPSAMVP

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

49.5

-0

1.1

46.8

36.1

Major PPT

70.7

0.47

0.9

62.1

39.9

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

37.5

-0.9

1.8

48.61

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008329

6225505 - 6233789

8285